Zitation: Poliseno, Angelo und Feregrino, Christian und Sartoretto, Stéphane und Aurelle, Didier und Wörheide, Gert und McFadden, Chaterine S. und Vargas, Sergio: Comparative mitogenomics, phylogeny and evolutionary history of Leptogorgia (Gorgoniidae). 2017. Open Data LMU. 10.5282/ubm/data.99
HTML (DNA alignment (Aatp6))
Atp6_ed.phy - Ergänzendes Material 62kB | |
HTML (DNA alignment (Atp8))
Atp8_ed.phy - Ergänzendes Material 18kB | |
HTML (DNA alignment (Cob))
Cob_ed.phy - Ergänzendes Material 102kB | |
HTML (DNA alignment (Cox1))
Cox1_ed.phy - Ergänzendes Material 145kB | |
HTML (DNA alignment (Cox2))
Cox2_ed.phy - Ergänzendes Material 67kB | |
HTML (DNA alignment (Cox3))
Cox3_ed.phy - Ergänzendes Material 70kB | |
HTML (DNA alignment (mtMutS))
MutS_ed.phy - Ergänzendes Material 293kB | |
HTML (DNA alignment (Nad1))
Nad1_ed.phy - Ergänzendes Material 86kB | |
HTML (DNA alignment (Nad2))
Nad2_ed.phy - Ergänzendes Material 103kB | |
HTML (DNA alignment (Nad3))
Nad3_ed.phy - Ergänzendes Material 30kB | |
HTML (DNA alignment (Nad4))
Nad4_ed.phy - Ergänzendes Material 129kB | |
HTML (DNA alignment (Nad4L))
Nad4L_ed.phy - Ergänzendes Material 25kB | |
HTML (DNA alignment (Nad5))
Nad5_ed.phy - Ergänzendes Material 167kB | |
HTML (DNA alignment (Nad6))
Nad6_ed.phy - Ergänzendes Material 50kB | |
HTML (DNA alignment (CDS- complete mitochondrial genomes))
Octocorallia_concatenated_CDS_ed.phy - Ergänzendes Material 1MB | |
HTML (DNA alignment (mtMutS_Leptogorgia))
Leptogorgia_mtMuts_114.nex - Ergänzendes Material 88kB |
DOI: 10.5282/ubm/data.99
Dieser auf "Open Data LMU" veröffentlichte Datensatz steht unter der "ODC-BY" v1.0: https://opendatacommons.org/licenses/index.html
Beschreibung
Molecular analyses of the ecologically important gorgonian octocoral genus Leptogorgia are scant and mostly deal with few species from restricted geographical regions. Here we explore the phylogenetic relationships and the evolutionary history of Leptogorgia using the complete mitochondrial genomes of six Leptogorgia species from different localities in the Atlantic, Mediterranean and eastern Pacific as well as four other genera of Gorgoniidae and Plexauridae. Our mitogenomic analyses showed high inter-specific diversity, variable nucleotide substitution rates and, for some species, novel genomic features such as ORFs of unknown function. The phylogenetic analyses using complete mitogenomes and an extended mtMutS dataset recovered Leptogorgia as polyphyletic, and the species considered in the analyses were split into two defined groups corresponding to different geographic regions, namely the eastern Pacific and the Atlantic-Mediterranean. Our phylogenetic analysis based on mtMutS also shows a clear separation between the eastern Atlantic and South African Leptogorgia, suggesting the need of a taxonomic revision for these forms. A time-calibrated phylogeny showed that the separation of eastern Pacific and western Atlantic species started ca. 20 Mya and suggested a recent divergence for eastern Pacific species and for L. sarmentosa-L. capverdensis. This last speciation event likely is related to the reopening of the Gibraltar Strait after the end of the Messinian crisis (5.96-5.33 Mya). Our results also revealed high inter-specific diversity among eastern Atlantic and South African species, highlighting a potential role of the geographical diversification processes and geological events occurring during the last 30 Ma in the Atlantic on the evolutionary history of these organisms
Stichwörter
Octocorals, Gorgonians, Leptogorgia, Mitogenome, Molecular phylogeny, Evolutionary history
Dokumententyp: | Daten |
---|---|
Name der Kontaktperson: | Poliseno, Angelo |
E-Mail der Kontaktperson: | a.poliseno.ita at gmail.com |
Fächer: | Geowissenschaften |
Dewey Dezimalklassifikation: | 500 Naturwissenschaften und Mathematik > 560 Paläontologie
500 Naturwissenschaften und Mathematik > 570 Biowissenschaften, Biologie 500 Naturwissenschaften und Mathematik > 590 Tiere (Zoologie) |
ID Code: | 99 |
Eingestellt von: | Mr. Angelo Poliseno |
Eingestellt am: | 24. Jan. 2017 06:52 |
Letzte Änderungen: | 23. Mrz. 2023 16:07 |
Nur für Administratoren und Editoren: Dokument bearbeiten